STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114862632Phosphoglucomutase-like protein 5. (597 aa)    
Predicted Functional Partners:
LOC114842036
UTP--glucose-1-phosphate uridylyltransferase-like.
 
 
 0.986
gbe1
1,4-alpha-glucan branching enzyme 1.
  
 
 0.985
h6pd
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
  
 0.977
ENSBSLP00000009631
Glucose-6-phosphate isomerase a.
  
 0.972
LOC114852753
Glucose-6-phosphate isomerase-like.
  
 0.972
LOC114844675
Glycogen debranching enzyme-like.
   
 
 0.970
LOC114869705
Glycogen phosphorylase, muscle form-like.
  
 
 0.959
pygm
Glycogen phosphorylase, muscle associated.
  
 
 0.959
pygl
Glycogen phosphorylase L.
  
 
 0.959
taldo1
Transaldolase 1.
  
 0.948
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.