STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
abcc8ATP binding cassette subfamily C member 8. (1583 aa)    
Predicted Functional Partners:
kcnj11
Potassium inwardly rectifying channel subfamily J member 11.
 
 
 0.991
kcnj8
Potassium inwardly rectifying channel subfamily J member 8.
 
 
 0.989
rapgef4
Rap guanine nucleotide exchange factor 4.
    
 0.885
LOC114843849
Rap guanine nucleotide exchange factor 4-like.
    
 0.885
prkacb
Protein kinase cAMP-activated catalytic subunit beta.
 
 
 0.761
ENSBSLP00000014214
annotation not available
 
 
 0.761
prkaca
Protein kinase cAMP-activated catalytic subunit alpha.
 
 
 0.761
LOC114861092
cAMP-dependent protein kinase catalytic subunit alpha.
 
 
 0.761
rapgef3
Rap guanine nucleotide exchange factor 3.
    
 0.713
LOC114862443
Na(+)/H(+) exchange regulatory cofactor NHE-RF2-like.
   
 0.711
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.