STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114862390Protein NipSnap homolog 1-like. (286 aa)    
Predicted Functional Partners:
mthfsd
Methenyltetrahydrofolate synthetase domain containing.
   
    0.782
smim12
Small integral membrane protein 12.
   
  
 0.739
snu13
Small nuclear ribonucleoprotein 13.
   
    0.694
utp15
UTP15 small subunit processome component.
   
    0.674
psmd1
Proteasome 26S subunit, non-ATPase 1.
   
    0.668
wdr6
WD repeat domain 6.
   
    0.668
lamtor1
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.
   
  0.659
nop56
NOP56 ribonucleoprotein.
   
    0.631
dbt
Dihydrolipoamide branched chain transacylase E2.
   
 
  0.626
LOC114857749
Structural maintenance of chromosomes protein 1B-like.
   
    0.579
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.