STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dhx37DEAH-box helicase 37. (1151 aa)    
Predicted Functional Partners:
ENSBSLP00000011755
UTP14C small subunit processome component.
   
 0.974
bysl
Bystin like.
   
 0.969
nop56
NOP56 ribonucleoprotein.
   
 0.958
ddx49
DEAD-box helicase 49.
  
 0.956
utp3
UTP3 small subunit processome component.
   
 0.950
cdc5l
Cell division cycle 5 like.
   
 0.945
wdr46
WD repeat domain 46.
   
 0.944
prpf19
pre-mRNA processing factor 19.
   
 0.940
rps6
Ribosomal protein S6.
    
  0.937
wdr36
WD repeat domain 36.
   
 0.934
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.