STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114867161Ornithine decarboxylase antizyme 2-like. (205 aa)    
Predicted Functional Partners:
odc1
Ornithine decarboxylase 1.
    
 0.973
LOC114865527
Antizyme inhibitor 1-like.
    
 0.958
azin1
Antizyme inhibitor 1.
    
 0.958
psmb4
Proteasome 20S subunit beta 4.
   
 0.720
psma8
Proteasome 20S subunit alpha 8.
   
 
  0.694
psmd3
Proteasome 26S subunit, non-ATPase 3.
   
 
 0.664
psma5
Proteasome 20S subunit alpha 5.
   
 
  0.664
psmb6
Proteasome 20S subunit beta 6.
   
 
 0.663
psmb2
Proteasome 20S subunit beta 2.
   
 
 0.662
psma2
Proteasome 20S subunit alpha 2.
   
 
  0.660
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.