STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114860228RNA binding protein fox-1 homolog 2-like. (464 aa)    
Predicted Functional Partners:
rbm24
RNA binding motif protein 24.
  
 
 0.750
LOC114858424
RNA-binding protein 38-like.
  
 
 0.745
LOC114855760
RNA-binding protein 38-like.
  
 
 0.743
RBPMS
RNA-binding protein with multiple splicing-like.
   
 
 0.696
LOC114842781
RNA-binding protein 24-like.
  
 
0.691
srsf2
Serine and arginine rich splicing factor 2.
  
  
0.665
LOC114845815
Protein quaking-B-like.
   
 
 0.664
LOC114848843
Protein quaking-A.
   
 
 0.664
LOC114852389
RNA-binding protein with multiple splicing 2.
   
 
 0.598
mecp2
methyl-CpG binding protein 2.
     
 0.597
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.