STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSBSLP00000023401annotation not available (476 aa)    
Predicted Functional Partners:
PTK7
Protein tyrosine kinase 7 (inactive).
    
  0.504
LOC114857424
Pulmonary surfactant-associated protein D-like.
    
 0.492
LOC114857422
Pulmonary surfactant-associated protein D-like.
    
 0.492
LOC114863211
Interleukin-1 beta-like.
   
 0.481
ENSBSLP00000050484
annotation not available
   
 0.468
HGFAC
HGF activator.
    
  0.459
habp2
Hyaluronan binding protein 2.
   
  0.459
mre11
MRE11 homolog, double strand break repair nuclease.
    
 0.452
ENSBSLP00000024376
annotation not available
  
 
  0.449
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.437
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.