STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
commd1Copper metabolism domain containing 1. (190 aa)    
Predicted Functional Partners:
cul2
Cullin 2.
    
 0.987
ccdc22
Coiled-coil domain containing 22.
    
 0.977
commd2
COMM domain containing 2.
    
 0.970
COMMD10
COMM domain containing 10.
   
 0.969
commd9
COMM domain containing 9.
    
 0.967
LOC114865028
COMM domain-containing protein 5-like.
    
 0.963
commd8
COMM domain containing 8.
    
 0.955
commd7
COMM domain containing 7.
    
 0.954
asb4
Ankyrin repeat and SOCS box containing 4.
    
 0.944
fem1b
Fem-1 homolog B.
    
  0.936
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.