STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpt2Carnitine palmitoyltransferase 2. (664 aa)    
Predicted Functional Partners:
acadm
acyl-CoA dehydrogenase medium chain.
   
 0.955
acadvl
acyl-CoA dehydrogenase very long chain.
   
 0.951
acox1
acyl-CoA oxidase 1.
   
 0.943
acad9
acyl-CoA dehydrogenase family member 9.
   
 0.943
acadl
acyl-CoA dehydrogenase long chain.
   
 0.933
acad8
acyl-CoA dehydrogenase family member 8.
   
 0.919
acox3
acyl-CoA oxidase 3, pristanoyl.
   
 0.915
LOC114862304
acyl-CoA dehydrogenase family member 11-like.
   
 0.915
LOC114864912
Malate synthase-like.
   
  
 0.902
acad11
acyl-CoA dehydrogenase family member 11.
   
 0.900
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.