STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114860817Glycogen [starch] synthase, muscle-like. (710 aa)    
Predicted Functional Partners:
gbe1
1,4-alpha-glucan branching enzyme 1.
  
 0.992
LOC114851225
Glycogenin-1-like.
   
 0.981
gyg1
Glycogenin 1.
   
 0.974
LOC114848456
Glycogenin-1-like.
   
 0.974
yipf6
Yip1 domain family member 6.
  
 0.937
LOC114844675
Glycogen debranching enzyme-like.
  
 0.937
ENSBSLP00000000823
Protein phosphatase 1, regulatory subunit 3Da.
   
 0.932
LOC114867343
Protein phosphatase 1 regulatory subunit 3B-like.
   
 0.932
ENSBSLP00000027616
annotation not available
   
 0.932
ppp1r3c
Protein phosphatase 1 regulatory subunit 3C.
   
 0.932
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.