STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
helqHelicase, POLQ like. (1023 aa)    
Predicted Functional Partners:
fancm
FA complementation group M.
   
 
 0.991
pola1
DNA polymerase alpha 1, catalytic subunit.
   
 0.922
rev3l
REV3 like, DNA directed polymerase zeta catalytic subunit.
   
 0.908
pold1
DNA polymerase delta 1, catalytic subunit.
   
 0.894
brca1
BRCA1 DNA repair associated.
   
 0.894
ENSBSLP00000030016
Polymerase (DNA directed), epsilon.
   
 0.887
pole2
DNA polymerase epsilon 2, accessory subunit.
   
 
 0.887
twnk
Twinkle mtDNA helicase.
   
 
 0.872
fancd2
FA complementation group D2.
   
 0.870
polg
DNA polymerase gamma, catalytic subunit.
   
 
 0.859
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.