STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114866049V-type proton ATPase subunit C 1-A. (407 aa)    
Predicted Functional Partners:
atp6v1d
ATPase H+ transporting V1 subunit D.
   
 0.997
atp6v1h
ATPase H+ transporting V1 subunit H.
   
 0.996
LOC114867372
V-type proton ATPase subunit G 1-like.
   
 0.992
LOC114869975
V-type proton ATPase catalytic subunit A-like.
   
 0.991
atp6v0b
ATPase H+ transporting V0 subunit b.
   
 0.990
LOC114852448
V-type proton ATPase subunit d 1.
   
 0.989
atp6ap2
ATPase H+ transporting accessory protein 2.
   
 0.989
atp6v1f
ATPase H+ transporting V1 subunit F.
   
 0.988
LOC114863044
V-type proton ATPase subunit E 1-like.
   
 0.984
LOC114844425
V-type proton ATPase subunit d 1-like.
   
 0.984
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.