STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zfpl1Zinc finger protein like 1. (329 aa)    
Predicted Functional Partners:
imp4
IMP U3 small nucleolar ribonucleoprotein 4.
      
 0.538
adsl
Adenylosuccinate lyase.
      
 0.531
tm9sf3
Transmembrane 9 superfamily member 3.
      
 0.509
rce1
Ras converting CAAX endopeptidase 1.
   
  
 0.454
stx5
Syntaxin 5.
   
  
 0.428
LOC114865256
Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-like.
      
 0.412
mgat1
Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase.
      
 0.412
LOC114864418
Magnesium transporter protein 1.
      
 0.408
LOC114855276
Tumor suppressor candidate 3.
      
 0.408
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.