STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmem41bTransmembrane protein 41B. (283 aa)    
Predicted Functional Partners:
wdr46
WD repeat domain 46.
 
      0.784
gldc
Glycine decarboxylase.
  
 
  0.725
pisd
Phosphatidylserine decarboxylase.
    
  0.702
pdhb
Pyruvate dehydrogenase E1 beta subunit.
     
 0.666
LOC114857741
Glycine cleavage system H protein, mitochondrial-like.
  
 
  0.659
LOC114852545
Glycine cleavage system H protein, mitochondrial-like.
  
 
  0.659
bckdhb
Branched chain keto acid dehydrogenase E1 subunit beta.
     
 0.656
nadk
NAD kinase.
  
 
  0.655
LOC114845067
NAD kinase-like.
  
 
  0.655
LOC114855914
Thioredoxin reductase 1, cytoplasmic-like.
    
  0.643
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.