STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ap1arAdaptor related protein complex 1 associated regulatory protein. (302 aa)    
Predicted Functional Partners:
trim23
Tripartite motif containing 23.
      
 0.437
nhsl2
NHS like 2.
      
 0.418
polr2m
RNA polymerase II subunit M.
      
 0.414
spryd7
SPRY domain containing 7.
      
 0.408
synrg
Synergin gamma.
      
 0.404
LOC114847037
Sorting nexin-4-like.
   
  
 0.403
LOC114862611
Sorting nexin-4-like.
   
  
 0.403
mtf1
Metal regulatory transcription factor 1.
  
     0.400
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.