STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sdr42e2Short chain dehydrogenase/reductase family 42E, member 2. (474 aa)    
Predicted Functional Partners:
gsr
Glutathione-disulfide reductase.
     
 0.620
vars1
valyl-tRNA synthetase 1.
     
 0.611
gsto1
Glutathione S-transferase omega 1.
     
 0.611
gss
Glutathione synthetase.
     
 0.562
ggnbp2
Gametogenetin binding protein 2.
     
 0.562
LOC114867651
Apoptosis-inducing factor 3-like.
     
 0.552
aifm3
Apoptosis inducing factor mitochondria associated 3.
     
 0.552
GSTM4
Glutathione S-transferase Mu 3-like.
     
 0.506
LOC114841779
Glutathione S-transferase 3-like.
     
 0.506
LOC114854526
Peroxiredoxin-6-like.
   
 0.492
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.