STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rrbp1Ribosome binding protein 1. (1198 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.869
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
  0.802
LOC114846828
ranBP2-like and GRIP domain-containing protein 3.
    
 0.722
ENSBSLP00000048337
annotation not available
    
  0.673
kdm6b
Lysine demethylase 6B.
    
 0.637
LOC114866026
Regulating synaptic membrane exocytosis protein 2-like.
    
  0.637
RIMS2
Regulating synaptic membrane exocytosis 2.
    
  0.637
LOC114870008
Uncharacterized LOC114870008.
    
 0.637
LOC114859876
Rho-related GTP-binding protein RhoN-like.
   
  0.620
RND2
Rho family GTPase 2.
   
  0.620
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.