STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
snx13Sorting nexin 13. (959 aa)    
Predicted Functional Partners:
LOC114861121
Ketosamine-3-kinase-like.
 
      0.842
LOC114850031
Sorting nexin-14-like.
   
 
0.624
snx14
Sorting nexin 14.
   
 
0.624
snx12
Sorting nexin 12.
     
 0.569
snx3
Sorting nexin 3.
     
 0.569
ENSBSLP00000013006
Sorting nexin 3.
     
 0.569
ankmy2
Ankyrin repeat and MYND domain containing 2.
    
 
 0.568
LOC114843629
Ribonuclease P protein subunit p25-like protein.
     
 0.535
LOC114851050
PC-esterase domain-containing protein 1A-like.
      
 0.534
snx17
Sorting nexin 17.
      
 0.529
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.