STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSBSLP00000024769Si:ch211-156b7.4. (189 aa)    
Predicted Functional Partners:
wdr18
WD repeat domain 18.
   
 0.580
tex10
Testis expressed 10.
   
 0.576
rhbdl3
Rhomboid like 3.
    
  0.573
pes1
Pescadillo ribosomal biogenesis factor 1.
   
 0.543
dut
Deoxyuridine triphosphatase.
   
  0.503
ripk4
Receptor interacting serine/threonine kinase 4.
   
 0.485
LOC114866140
H-2 class I histocompatibility antigen, Q9 alpha chain-like.
    
  0.482
LOC114851280
H-2 class II histocompatibility antigen, A-U alpha chain-like.
   
  0.479
LOC114850360
H-2 class II histocompatibility antigen, A-U alpha chain-like.
   
  0.479
cenpn
Centromere protein N.
    
  0.479
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.