STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cdca3Cell division cycle associated 3. (436 aa)    
Predicted Functional Partners:
cdca8
Cell division cycle associated 8.
   
  
 0.949
ube2c
Ubiquitin conjugating enzyme E2 C.
   
  
 0.940
dlgap5
DLG associated protein 5.
   
  
 0.938
LOC114846480
Baculoviral IAP repeat-containing protein 5.2-like.
   
  
 0.937
cdc20b
Cell division cycle 20B.
   
 
 0.931
cdc20
Cell division cycle 20.
   
 
 0.931
pbk
PDZ binding kinase.
   
  
 0.929
kif11
Kinesin family member 11.
   
  
 0.914
bub1b
BUB1 mitotic checkpoint serine/threonine kinase B.
   
  
 0.882
ttk
TTK protein kinase.
   
  
 0.878
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.