ENSBSLP00000025110 protein (Betta splendens)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSBSLP00000025110

annotation not available (366 aa)

Predicted Functional Partners:

gak

0.995

bag3

0.945

grpel1

0.922

stip1

0.917

dnajc10

0.912

tsc1

0.911

CLPB

0.894

hsp90ab1

0.893

LOC114849323

0.893

DNAJA4

0.886

Your Current Organism:

Betta splendens

NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CLPB	DNAJA4	ENSBSLP00000029725	ENSBSLP00000021022	ClpB homolog, mitochondrial AAA ATPase chaperonin.	dnaJ homolog subfamily A member 4-like.	0.916
CLPB	ENSBSLP00000025110	ENSBSLP00000029725	ENSBSLP00000025110	ClpB homolog, mitochondrial AAA ATPase chaperonin.	annotation not available	0.894
CLPB	LOC114849323	ENSBSLP00000029725	ENSBSLP00000040470	ClpB homolog, mitochondrial AAA ATPase chaperonin.	Heat shock protein HSP 90-alpha 1.	0.859
CLPB	dnajc10	ENSBSLP00000029725	ENSBSLP00000048299	ClpB homolog, mitochondrial AAA ATPase chaperonin.	DnaJ heat shock protein family (Hsp40) member C10.	0.956
CLPB	grpel1	ENSBSLP00000029725	ENSBSLP00000000473	ClpB homolog, mitochondrial AAA ATPase chaperonin.	GrpE like 1, mitochondrial.	0.988
CLPB	hsp90ab1	ENSBSLP00000029725	ENSBSLP00000011377	ClpB homolog, mitochondrial AAA ATPase chaperonin.	Heat shock protein 90 alpha family class B member 1.	0.859
CLPB	stip1	ENSBSLP00000029725	ENSBSLP00000026107	ClpB homolog, mitochondrial AAA ATPase chaperonin.	Stress induced phosphoprotein 1.	0.862
CLPB	tsc1	ENSBSLP00000029725	ENSBSLP00000039870	ClpB homolog, mitochondrial AAA ATPase chaperonin.	TSC complex subunit 1.	0.859
DNAJA4	CLPB	ENSBSLP00000021022	ENSBSLP00000029725	dnaJ homolog subfamily A member 4-like.	ClpB homolog, mitochondrial AAA ATPase chaperonin.	0.916
DNAJA4	ENSBSLP00000025110	ENSBSLP00000021022	ENSBSLP00000025110	dnaJ homolog subfamily A member 4-like.	annotation not available	0.886
DNAJA4	LOC114849323	ENSBSLP00000021022	ENSBSLP00000040470	dnaJ homolog subfamily A member 4-like.	Heat shock protein HSP 90-alpha 1.	0.852
DNAJA4	bag3	ENSBSLP00000021022	ENSBSLP00000011990	dnaJ homolog subfamily A member 4-like.	BCL2 associated athanogene 3.	0.835
DNAJA4	dnajc10	ENSBSLP00000021022	ENSBSLP00000048299	dnaJ homolog subfamily A member 4-like.	DnaJ heat shock protein family (Hsp40) member C10.	0.591
DNAJA4	gak	ENSBSLP00000021022	ENSBSLP00000013277	dnaJ homolog subfamily A member 4-like.	Cyclin G associated kinase.	0.516
DNAJA4	grpel1	ENSBSLP00000021022	ENSBSLP00000000473	dnaJ homolog subfamily A member 4-like.	GrpE like 1, mitochondrial.	0.714
DNAJA4	hsp90ab1	ENSBSLP00000021022	ENSBSLP00000011377	dnaJ homolog subfamily A member 4-like.	Heat shock protein 90 alpha family class B member 1.	0.852
DNAJA4	stip1	ENSBSLP00000021022	ENSBSLP00000026107	dnaJ homolog subfamily A member 4-like.	Stress induced phosphoprotein 1.	0.915
DNAJA4	tsc1	ENSBSLP00000021022	ENSBSLP00000039870	dnaJ homolog subfamily A member 4-like.	TSC complex subunit 1.	0.812
ENSBSLP00000025110	CLPB	ENSBSLP00000025110	ENSBSLP00000029725	annotation not available	ClpB homolog, mitochondrial AAA ATPase chaperonin.	0.894
ENSBSLP00000025110	DNAJA4	ENSBSLP00000025110	ENSBSLP00000021022	annotation not available	dnaJ homolog subfamily A member 4-like.	0.886