STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cdk12Cyclin dependent kinase 12. (1319 aa)    
Predicted Functional Partners:
CCNK
Cyclin K.
   
 0.989
supt5h
SPT5 homolog, DSIF elongation factor subunit.
    
 0.983
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.976
polr2a
RNA polymerase II subunit A.
   
 0.973
cdc73
Cell division cycle 73.
   
 0.942
ENSBSLP00000010730
annotation not available
    
 0.933
supt6h
SPT6 homolog, histone chaperone and transcription elongation factor.
   
 0.917
LOC114859079
cyclin-T1-like.
   
 0.916
LOC114848624
cyclin-T2-like.
   
 0.916
ccnt2
Cyclin T2.
   
 0.916
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.