STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rab35RAB35, member RAS oncogene family. (207 aa)    
Predicted Functional Partners:
dennd1a
DENN domain containing 1A.
    
 0.967
LOC114869316
Anaphase-promoting complex subunit 10.
    
 0.953
hspb11
Heat shock protein family B (small) member 11.
    
 0.953
LOC114859936
DENN domain-containing protein 1B-like.
    
 0.911
DENND1B
DENN domain containing 1B.
    
 0.911
ift88
Intraflagellar transport 88.
    
 0.904
ift22
Intraflagellar transport 22.
    
 0.894
cluap1
Clusterin associated protein 1.
    
 0.885
ift80
Intraflagellar transport 80.
    
 0.883
ttc26
Tetratricopeptide repeat domain 26.
    
 0.878
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.