STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tnrTenascin R. (1382 aa)    
Predicted Functional Partners:
itga2
Integrin subunit alpha 2.
    
 0.883
itga1
Integrin subunit alpha 1.
    
 0.883
itga4
Integrin subunit alpha 4.
    
 0.883
itga8
Integrin subunit alpha 8.
    
 0.883
itga11
Integrin subunit alpha 11.
    
 0.883
itga9
Integrin subunit alpha 9.
    
 0.883
ITGA7
Integrin subunit alpha 7.
    
 0.883
itga10
Integrin subunit alpha 10.
    
 0.883
itgb8
Integrin subunit beta 8.
    
0.865
itgb6
Integrin subunit beta 6.
    
0.865
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.