STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pignPhosphatidylinositol glycan anchor biosynthesis class N. (930 aa)    
Predicted Functional Partners:
pigv
Phosphatidylinositol glycan anchor biosynthesis class V.
   
 0.936
pla2g4a
Phospholipase A2 group IVA.
   
 
  0.841
coasy
Coenzyme A synthase.
    
  0.838
pigk
Phosphatidylinositol glycan anchor biosynthesis class K.
    
 0.832
nudt12
Nudix hydrolase 12.
   
 0.828
pigf
Phosphatidylinositol glycan anchor biosynthesis class F.
    
 0.828
pigt
Phosphatidylinositol glycan anchor biosynthesis class T.
    
 0.781
kdsr
3-ketodihydrosphingosine reductase.
     
 0.760
piga
Phosphatidylinositol glycan anchor biosynthesis class A.
    
 0.699
gpaa1
Glycosylphosphatidylinositol anchor attachment 1.
   
 0.693
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.