STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
abcc3ATP binding cassette subfamily C member 3. (1550 aa)    
Predicted Functional Partners:
suox
Sulfite oxidase.
   
 
  0.838
ENSBSLP00000048337
annotation not available
  
  0.693
katnal2
Katanin catalytic subunit A1 like 2.
  
 0.683
gopc
Golgi associated PDZ and coiled-coil motif containing.
   
 0.667
usp10
Ubiquitin specific peptidase 10.
    
  0.647
LOC114861067
Inward rectifier potassium channel 2-like.
    
 0.618
kcnj5
Potassium inwardly rectifying channel subfamily J member 5.
    
 0.618
kcnj11
Potassium inwardly rectifying channel subfamily J member 11.
 
  
 0.618
LOC114846053
G protein-activated inward rectifier potassium channel 1-like.
    
 0.618
KCNJ4
ATP-sensitive inward rectifier potassium channel 12-like.
    
 0.618
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.