STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114859900Homeobox protein Hox-B7-B-like. (283 aa)    
Predicted Functional Partners:
LOC114846289
Homeobox protein Hox-B6b.
  
 
0.966
LOC114859899
Homeobox protein Hox-B6a-like.
   
 
0.964
LOC114859898
Homeobox protein Hox-B5a-like.
  
 
0.924
hoxb5
Homeobox B5.
   
 
0.920
HOXA7
Homeobox protein Hox-A7-like.
  
  
0.913
hoxc6
Homeobox C6.
   
 
0.836
LOC114847112
Homeobox protein Hox-D4a.
   
 
0.820
LOC114859902
Homeobox protein Hox-B4a-like.
  
 
0.802
ENSBSLP00000023804
annotation not available
    
 0.801
nr5a1
Nuclear receptor subfamily 5 group A member 1.
    
 0.801
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.