STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114859902Homeobox protein Hox-B4a-like. (250 aa)    
Predicted Functional Partners:
LOC114859895
Homeobox protein Hox-B3a.
   
  
0.880
LOC114859898
Homeobox protein Hox-B5a-like.
  
 
0.876
hoxb5
Homeobox B5.
  
 
0.875
LOC114859900
Homeobox protein Hox-B7-B-like.
  
 
0.802
LOC114859899
Homeobox protein Hox-B6a-like.
   
  
0.773
LOC114846289
Homeobox protein Hox-B6b.
   
  
0.773
LOC114847112
Homeobox protein Hox-D4a.
  
  
0.767
hoxc4
Homeobox C4.
  
  
0.740
LOC114858390
Homeobox protein Hox-C5a-like.
  
  
0.732
hoxc6
Homeobox C6.
   
  
0.732
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.