STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114860579Coatomer subunit zeta-1-like. (189 aa)    
Predicted Functional Partners:
arcn1
Archain 1.
   
 0.993
copb1
Coatomer protein complex subunit beta 1.
   
 0.992
copg2
Coatomer protein complex subunit gamma 2.
    
 0.992
cope
Coatomer protein complex subunit epsilon.
   
 0.971
LOC114859374
Coatomer subunit zeta-1.
  
  
 
0.927
COPB2
Coatomer protein complex subunit beta 2.
   
 0.911
LOC114844930
Coatomer subunit beta.
   
 0.911
copa
Coatomer protein complex subunit alpha.
   
 0.910
ENSBSLP00000047526
annotation not available
   
 0.910
ENSBSLP00000047558
annotation not available
   
 0.910
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.