STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114862741Protein Wnt-5b. (389 aa)    
Predicted Functional Partners:
ryk
Receptor like tyrosine kinase.
    
 0.923
frzb
Frizzled related protein.
    
 0.897
porcn
Porcupine O-acyltransferase.
    
 0.879
LOC114859378
Protein-serine O-palmitoleoyltransferase porcupine-like.
    
 0.879
dkk1
Dickkopf WNT signaling pathway inhibitor 1.
    
 0.869
sfrp2
Secreted frizzled related protein 2.
    
 0.866
LOC114867552
Secreted frizzled-related protein 2-like.
    
 0.866
LOC114852121
Frizzled-3-like.
    
 0.811
fzd3
Frizzled class receptor 3.
    
 0.811
fzd6
Frizzled class receptor 6.
    
 0.811
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.