STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prtfdc1Phosphoribosyl transferase domain containing 1. (220 aa)    
Predicted Functional Partners:
ephx2
Epoxide hydrolase 2.
  
 
 0.860
adsl
Adenylosuccinate lyase.
    
 0.854
atic
5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase.
    
 0.853
gmps
Guanine monophosphate synthase.
  
 
 0.853
gart
annotation not available
  
 
 0.840
gda
Guanine deaminase.
    
 0.813
LOC114870611
Peripheral plasma membrane protein CASK-like.
    
 0.806
cask
Calcium/calmodulin dependent serine protein kinase.
    
 0.806
atp5f1c
ATP synthase F1 subunit gamma.
     
 0.792
atp5po
ATP synthase peripheral stalk subunit OSCP.
   
 
 0.788
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.