STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mtmr10Myotubularin related protein 10. (770 aa)    
Predicted Functional Partners:
mtmr2
Myotubularin related protein 2.
   
0.792
LOC114849154
Myotubularin-related protein 1-like.
   
0.769
mtm1
Myotubularin 1.
   
0.769
pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.708
pikfyve
Phosphoinositide kinase, FYVE-type zinc finger containing.
     
 0.675
lrguk
Leucine rich repeats and guanylate kinase domain containing.
   
   0.667
pi4ka
Phosphatidylinositol 4-kinase alpha.
     
 0.630
cdipt
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
     
 0.629
mtmr3
Myotubularin related protein 3.
    
0.589
MTMR4
Myotubularin related protein 4.
    
0.589
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.