STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114857415NACHT, LRR and PYD domains-containing protein 1-like. (835 aa)    
Predicted Functional Partners:
LOC114843270
Apoptosis-associated speck-like protein containing a CARD.
   
 
 0.832
LOC114853980
Apoptosis regulator Bcl-2-like.
   
 
  0.789
ENSBSLP00000000233
annotation not available
   
 
  0.668
LOC114847615
Sterile alpha motif domain-containing protein 9-like.
   
 
  0.668
uevld
UEV and lactate/malate dehyrogenase domains.
     
 0.631
LOC114869088
NLR family CARD domain-containing protein 3-like.
   
 
 0.555
nod1
Nucleotide binding oligomerization domain containing 1.
   
 
  0.512
nod2
Nucleotide binding oligomerization domain containing 2.
   
 
  0.512
LOC114858201
Bcl-2-like protein 1.
   
 
  0.502
LOC114855762
Bcl-2-like protein 1.
   
 
  0.502
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.