STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114847049CASP8 and FADD-like apoptosis regulator. (463 aa)    
Predicted Functional Partners:
fadd
Fas associated via death domain.
    
 0.995
ripk1
Receptor interacting serine/threonine kinase 1.
    
 0.988
LOC114844036
Caspase-8-like.
 
 
0.988
LOC114842188
Tumor necrosis factor receptor superfamily member 6-like.
   
 0.988
LOC114847689
Caspase-8-like.
   
0.987
LOC114844037
Caspase-3-like.
 
 
 0.985
ENSBSLP00000028227
annotation not available
   
 0.950
LOC114858841
E3 ubiquitin-protein ligase Itchy-like.
    
 0.944
LOC114855782
E3 ubiquitin-protein ligase Itchy-like.
    
 0.944
atg3
Autophagy related 3.
    
 0.937
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.