STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chpf2Chondroitin polymerizing factor 2. (791 aa)    
Predicted Functional Partners:
chsy1
Chondroitin sulfate synthase 1.
    
0.917
LOC114862672
Chondroitin sulfate N-acetylgalactosaminyltransferase 1-like.
    
0.891
csgalnact1
Chondroitin sulfate N-acetylgalactosaminyltransferase 1.
    
0.891
csgalnact2
Chondroitin sulfate N-acetylgalactosaminyltransferase 2.
    
0.891
chpf
Chondroitin polymerizing factor.
  
  
 
0.840
b4galnt4
beta-1,4-N-acetyl-galactosaminyltransferase 4.
    
 0.687
dcn
Decorin.
     
 0.530
LOC114854465
Protein ALKAL-like.
   
    0.495
alkal2
ALK and LTK ligand 2.
   
    0.495
ENSBSLP00000004767
Si:dkey-193c22.2.
     
 0.480
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.