STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fbxw12F-box and WD repeat domain containing 12. (475 aa)    
Predicted Functional Partners:
ccnh
Cyclin H.
    
 0.983
mnat1
MNAT1 component of CDK activating kinase.
   
 0.978
gtf2h3
General transcription factor IIH subunit 3.
    
 0.977
ercc2
ERCC excision repair 2, TFIIH core complex helicase subunit.
    
 0.977
gtf2h1
General transcription factor IIH subunit 1.
   
 0.974
LOC114846351
General transcription factor IIH subunit 2-like.
   
 0.974
ercc3
ERCC excision repair 3, TFIIH core complex helicase subunit.
    
 0.973
gtf2h4
General transcription factor IIH subunit 4.
    
 0.973
polr2a
RNA polymerase II subunit A.
    
 0.970
gtf2e2
General transcription factor IIE subunit 2.
   
 0.966
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.