STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114858527Potassium voltage-gated channel subfamily D member 3-like. (644 aa)    
Predicted Functional Partners:
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
   
 0.958
rpl23a
Ribosomal protein L23a.
  
 0.834
rpl35
Ribosomal protein L35.
  
 0.833
rpl31
Ribosomal protein L31.
   
 0.832
rpl24
Ribosomal protein L24.
  
 0.832
rpl29
Ribosomal protein L29.
   
 0.832
rpl32
Ribosomal protein L32.
  
 0.831
rpl35a
Ribosomal protein L35a.
   
 0.830
rpl30
Ribosomal protein L30.
   
 0.830
RPL36A
60S ribosomal protein L36a.
  
 0.828
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.