STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114870635PR domain zinc finger protein 8-like. (516 aa)    
Predicted Functional Partners:
LOC114848581
Histone-lysine N-methyltransferase SETDB2-like.
    
 0.618
setdb1
SET domain bifurcated histone lysine methyltransferase 1.
    
 0.518
LOC114851168
Cytochrome b-245 heavy chain.
   
 0.513
nox4
NADPH oxidase 4.
   
 0.513
XK
X-linked Kx blood group.
   
 0.513
xkrx
XK related X-linked.
   
 0.513
nox1
NADPH oxidase 1.
   
 0.513
sh3rf3
SH3 domain containing ring finger 3.
    
 0.498
bhlhe22
Basic helix-loop-helix family member e22.
   
  
 0.497
EZH1
Enhancer of zeste 1 polycomb repressive complex 2 subunit.
    
 0.490
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.