STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
m6prMannose-6-phosphate receptor, cation dependent. (275 aa)    
Predicted Functional Partners:
igf2r
Insulin like growth factor 2 receptor.
     
 0.921
gga3
Golgi associated, gamma adaptin ear containing, ARF binding protein 3.
    
 
 0.917
LOC114859390
ADP-ribosylation factor-binding protein GGA3-like.
    
 
 0.917
vti1a
Vesicle transport through interaction with t-SNAREs 1A.
   
 
 0.783
GCC2
GRIP and coiled-coil domain containing 2.
    
 0.727
vti1b
Vesicle transport through interaction with t-SNAREs 1B.
   
 
 0.708
vamp7
Vesicle associated membrane protein 7.
     
 0.701
ENSBSLP00000017028
annotation not available
   
 0.699
LOC114853548
Perilipin-2-like.
   
 0.699
LOC114868476
Perilipin-2-like.
   
 0.699
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.