STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbm19RNA binding motif protein 19. (833 aa)    
Predicted Functional Partners:
imp4
IMP U3 small nucleolar ribonucleoprotein 4.
   
  0.999
LOC114842947
Periodic tryptophan protein 2 homolog.
   
 0.998
LOC114846033
Ribosome biogenesis protein BMS1 homolog.
   
 0.997
LOC114846317
Ribosome biogenesis protein BMS1 homolog.
   
 0.997
bysl
Bystin like.
   
 0.997
pdcd11
Programmed cell death 11.
   
  0.996
wdr12
WD repeat domain 12.
   
 
 0.996
nop9
NOP9 nucleolar protein.
   
 0.996
wdr36
WD repeat domain 36.
   
 0.996
wdr46
WD repeat domain 46.
   
  0.996
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.