STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSBSLP00000026573annotation not available (255 aa)    
Predicted Functional Partners:
PTK7
Protein tyrosine kinase 7 (inactive).
    
  0.504
HGFAC
HGF activator.
    
  0.459
habp2
Hyaluronan binding protein 2.
    
  0.459
mre11
MRE11 homolog, double strand break repair nuclease.
    
 0.452
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.437
LOC114863211
Interleukin-1 beta-like.
   
  0.435
rad50
RAD50 double strand break repair protein.
    
  0.433
LOC114857213
P53-induced death domain-containing protein 1-like.
    
  0.423
cd79a
CD79a molecule.
    
 0.422
LOC114845602
B-cell antigen receptor complex-associated protein beta chain-like.
    
  0.419
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.