STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uxs1UDP-glucuronate decarboxylase 1. (419 aa)    
Predicted Functional Partners:
ugdh
UDP-glucose 6-dehydrogenase.
 0.997
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
   
  0.990
gmppb
GDP-mannose pyrophosphorylase B.
  
 0.949
gale
UDP-galactose-4-epimerase.
  
0.934
gmds
GDP-mannose 4,6-dehydratase.
  
 0.930
tgds
TDP-glucose 4,6-dehydratase.
  
 
0.924
gmppa
GDP-mannose pyrophosphorylase A.
  
 0.916
LOC114842036
UTP--glucose-1-phosphate uridylyltransferase-like.
    
 0.916
h6pd
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
  
 0.906
rps6
Ribosomal protein S6.
 
 
 0.904
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.