STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sun1Sad1 and UNC84 domain containing 1. (1080 aa)    
Predicted Functional Partners:
ENSBSLP00000015897
annotation not available
    
 0.936
ENSBSLP00000034816
annotation not available
    
 0.936
ENSBSLP00000034871
annotation not available
    
 0.936
clmn
Calmin.
    
 0.908
mrvi1
Murine retrovirus integration site 1 homolog.
    
 0.827
ENSBSLP00000015082
annotation not available
    
 0.827
lrmp
Lymphoid restricted membrane protein.
    
 0.827
LOC114857359
Proline-rich receptor-like protein kinase PERK9.
    
 0.827
tpr
Translocated promoter region, nuclear basket protein.
    
 
 0.786
H2AZ1
Histone H2A.Z.
    
 
 0.755
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.