STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
syce1Synaptonemal complex central element protein 1. (224 aa)    
Predicted Functional Partners:
syce3
Synaptonemal complex central element protein 3.
    
 0.862
sycp3
Synaptonemal complex protein 3.
     
 0.682
rec8
REC8 meiotic recombination protein.
     
 0.665
smc3
Structural maintenance of chromosomes 3.
   
 
 0.591
spo11
SPO11 initiator of meiotic double stranded breaks.
      
 0.541
rbm20
RNA binding motif protein 20.
   
 
 0.503
LOC114844020
HORMA domain-containing protein 1-like.
      
 0.465
LOC114843354
HORMA domain-containing protein 1-like.
      
 0.465
cdca5
Cell division cycle associated 5.
      
 0.459
LOC114865960
Double-strand-break repair protein rad21 homolog A-like.
     
 0.446
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.