STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114842747Metaxin-1-like. (326 aa)    
Predicted Functional Partners:
mtx2
Metaxin 2.
    
0.980
LOC114857482
Sorting and assembly machinery component 50 homolog A.
   
 0.971
samm50
SAMM50 sorting and assembly machinery component.
   
 0.971
TOMM7
Translocase of outer mitochondrial membrane 7.
    
 0.970
LOC114865384
Mitochondrial import receptor subunit TOM40 homolog.
   
 0.951
TOMM40L
Mitochondrial import receptor subunit TOM40B-like.
   
 0.951
tomm40
Translocase of outer mitochondrial membrane 40.
   
 0.951
tomm22
Translocase of outer mitochondrial membrane 22.
    
 0.946
tomm5
Translocase of outer mitochondrial membrane 5.
    
 0.941
tomm6
Translocase of outer mitochondrial membrane 6.
   
 
 0.928
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.