STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sv2aSynaptic vesicle glycoprotein 2A. (737 aa)    
Predicted Functional Partners:
LOC114864912
Malate synthase-like.
   
 
 0.866
LAMC2
Laminin subunit gamma-2-like.
     
 0.853
lamb1
Laminin subunit beta 1.
     
 0.843
LAMA2
Laminin subunit alpha 2.
     
 0.841
pla2g4a
Phospholipase A2 group IVA.
    
 0.841
LOC114862483
Laminin subunit beta-1-like.
     
 0.837
lamc3
Laminin subunit gamma 3.
     
 0.826
lamc1
Laminin subunit gamma 1.
     
 0.826
lama4
Laminin subunit alpha 4.
     
 0.817
ENSBSLP00000045169
Laminin, alpha 5.
     
 0.817
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.