STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
catCatalase. (539 aa)    
Predicted Functional Partners:
scp2
Sterol carrier protein 2.
   
 0.971
LOC114853152
Non-specific lipid-transfer protein-like.
   
 0.971
rpp14
Ribonuclease P/MRP subunit p14.
   
 0.970
park7
Parkinsonism associated deglycase.
  
 0.968
hsdl2
Hydroxysteroid dehydrogenase like 2.
  
 0.959
sod2
Superoxide dismutase 2.
  
 0.953
LOC114854578
Extracellular superoxide dismutase [Cu-Zn]-like.
  
 0.926
SOD3
Extracellular superoxide dismutase [Cu-Zn]-like.
  
 0.926
sod1
Superoxide dismutase 1.
  
 0.926
treh
Trehalase.
   
  
 0.914
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.