STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pou2f1POU class 2 homeobox 1. (726 aa)    
Predicted Functional Partners:
sp1
Sp1 transcription factor.
    
  0.739
LOC114861426
snRNA-activating protein complex subunit 4-like.
    
  0.731
ENSBSLP00000016169
annotation not available
    
 
 0.715
LOC114860119
Histone acetyltransferase p300-like.
   
 0.666
LOC114846151
Histone acetyltransferase p300-like.
   
 0.666
znf143
Zinc finger protein 143.
    
  0.665
gtf2b
General transcription factor IIB.
    
 0.656
gtf2e1
General transcription factor IIE subunit 1.
    
  0.648
polr3k
RNA polymerase III subunit K.
     
 0.629
pcf11
PCF11 cleavage and polyadenylation factor subunit.
     
 0.628
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.