STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114861979Tricarboxylate transport protein, mitochondrial-like. (317 aa)    
Predicted Functional Partners:
cs
Citrate synthase.
   
 
 0.918
LOC114864912
Malate synthase-like.
   
  
 0.832
pole2
DNA polymerase epsilon 2, accessory subunit.
   
   0.722
c6h15orf40
Chromosome 6 C15orf40 homolog.
    
   0.706
drg1
Developmentally regulated GTP binding protein 1.
    
   0.706
slc25a4
Solute carrier family 25 member 4.
   
 
0.663
LOC114870034
ADP/ATP translocase 3-like.
   
 
0.663
LOC114864615
ADP/ATP translocase 3-like.
   
 
0.663
SLC25A5
ADP/ATP translocase 3.
   
 
0.663
drg2
Developmentally regulated GTP binding protein 2.
    
   0.657
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.