STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114852954Plasma protease C1 inhibitor-like. (591 aa)    
Predicted Functional Partners:
LOC114842912
Complement C1r subcomponent-like.
  
 0.939
C1QA
Complement C1q subcomponent subunit C-like.
   
 0.915
masp1
Mannan binding lectin serine peptidase 1.
  
 0.907
LOC114842913
Calcium-dependent serine proteinase-like.
  
 0.907
LOC114855982
Complement C1q subcomponent subunit C-like.
   
 0.880
LOC114857424
Pulmonary surfactant-associated protein D-like.
     
 0.847
LOC114857422
Pulmonary surfactant-associated protein D-like.
     
 0.847
HGFAC
HGF activator.
   
 0.813
c1qbp
Complement C1q binding protein.
   
 0.751
LOC114869783
Complement factor B-like.
  
 0.733
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.